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delnx 0.3.0 documentation
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  • 🚀 Installation
  • 📖 API reference
    • delnx.pp.pseudobulk
    • delnx.pp.size_factors
    • delnx.tl.nb_fit
    • delnx.tl.nb_test
    • delnx.tl.nb_de
    • delnx.tl.NBFitResult
    • delnx.tl.de
    • delnx.tl.rank_de
    • delnx.tl.grouped
    • delnx.tl.log2fc
    • delnx.tl.auroc
    • delnx.tl.build_design
    • delnx.tl.gsea
    • delnx.models.LinearRegression
    • delnx.models.LogisticRegression
    • delnx.models.NegativeBinomialRegression
    • delnx.pl.dotplot
    • delnx.pl.heatmap
    • delnx.pl.matrixplot
    • delnx.pl.violinplot
    • delnx.pl.volcanoplot
  • 👥 Contributing guide
  • 🎓 Notebooks
    • Benchmark: delnx vs R glmGamPoi
    • Overview
    • DE on GLI3 knockout dataset
    • Comparing DE methods in delnx
    • Negative binomial DE with quasi-likelihood dispersion shrinkage
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🎓 Notebooks¶

  • Benchmark: delnx vs R glmGamPoi
  • Overview
  • DE on GLI3 knockout dataset
  • Comparing DE methods in delnx
  • Negative binomial DE with quasi-likelihood dispersion shrinkage
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Benchmark: delnx vs R glmGamPoi
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👥 Contributing guide
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